| * | 2009 |
| 32 | EE | Matthias Samwald,
Ernest Lim,
Peter Masiar,
Luis N. Marenco,
Huajun Chen,
Thomas M. Morse,
Pradeep Mutalik,
Gordon M. Shepherd,
Perry L. Miller,
Kei-Hoi Cheung:
Entrez Neuron RDFa: A Pragmatic Semantic Web Application for Data Integration in Neuroscience Research.
MIE 2009: 317-321 |
| 31 | EE | Kei-Hoi Cheung,
Ernest Lim,
Matthias Samwald,
Huajun Chen,
Luis N. Marenco,
Matthew Holford,
Thomas M. Morse,
Pradeep Mutalik,
Gordon M. Shepherd,
Perry L. Miller:
Approaches to neuroscience data integration.
Briefings in Bioinformatics 10(4): 345-353 (2009) |
| 2007 |
| 30 | EE | Hugo Y. K. Lam,
Luis N. Marenco,
Tim Clark,
Yong Gao,
June Kinoshita,
Gordon M. Shepherd,
Perry L. Miller,
Elizabeth Wu,
Gwendolyn T. Wong,
Nian Liu,
Chiquito J. Crasto,
Thomas M. Morse,
Susie Stephens,
Kei-Hoi Cheung:
AlzPharm: integration of neurodegeneration data using RDF.
BMC Bioinformatics 8(S-3): (2007) |
| 29 | EE | Chiquito J. Crasto,
Luis N. Marenco,
Nian Liu,
Thomas M. Morse,
Kei-Hoi Cheung,
Peter C. Lai,
Gautam Bahl,
Peter Masiar,
Hugo Y. K. Lam,
Ernest Lim,
Huajun Chen,
Prakash M. Nadkarni,
Michele Migliore,
Perry L. Miller,
Gordon M. Shepherd:
SenseLab: new developments in disseminating neuroscience information.
Briefings in Bioinformatics 8(3): 150-162 (2007) |
| 28 | EE | Mark Gerstein,
Dov Greenbaum,
Kei Cheung,
Perry L. Miller:
An interdepartmental Ph.D. program in computational biology and bioinformatics: The Yale perspective.
Journal of Biomedical Informatics 40(1): 73-79 (2007) |
| 27 | EE | Valentin Dinu,
Hongyu Zhao,
Perry L. Miller:
Integrating domain knowledge with statistical and data mining methods for high-density genomic SNP disease association analysis.
Journal of Biomedical Informatics 40(6): 750-760 (2007) |
| 2004 |
| 26 | | Kei-Hoi Cheung,
Janet Hager,
Deyun Pan,
Ranjana Srivastava,
Shrikant Mane,
Yuli Li,
Perry L. Miller,
Kenneth R. Williams:
KARMA: a web server application for comparing and annotating heterogeneous microarray platforms.
Nucleic Acids Research 32(Web-Server-Issue): 441-444 (2004) |
| 2003 |
| 25 | | H. Rajeevan,
Michael V. Osier,
Kei-Hoi Cheung,
H. Deng,
L. Druskin,
R. Heinzen,
Judith R. Kidd,
S. Stein,
Andrew J. Pakstis,
Nick P. Tosches,
C.-C. Yeh,
Perry L. Miller,
Kenneth K. Kidd:
ALFRED: the ALelle FREquency Database. Update.
Nucleic Acids Research 31(1): 270-271 (2003) |
| 2002 |
| 24 | EE | Cynthia Brandt,
Richard Morse,
Keri Matthews,
Kexin Sun,
Aniruddha M. Deshpande,
Rohit Gadagkar,
Dorothy B. Cohen,
Perry L. Miller,
Prakash M. Nadkarni:
Metadata-driven creation of data marts from an EAV-modeled clinical research database.
I. J. Medical Informatics 65(3): 225-241 (2002) |
| 23 | EE | Kei-Hoi Cheung,
Janet Hager,
Kenneth Nelson,
Kevin White,
Yuli Li,
Michael Snyder,
Kenneth R. Williams,
Perry L. Miller:
A dynamic approach to mapping coordinates between microplates and microarrays.
Journal of Biomedical Informatics 35(5-6): 306-312 (2002) |
| 22 | | Chiquito J. Crasto,
Luis N. Marenco,
Perry L. Miller,
Gordon M. Shepherd:
Olfactory Receptor Database: a metadata-driven automated population from sources of gene and protein sequences.
Nucleic Acids Research 30(1): 354-360 (2002) |
| 21 | | Anuj Kumar,
Kei-Hoi Cheung,
Nick P. Tosches,
Peter Masiar,
Yang Liu,
Perry L. Miller,
Michael Snyder:
The TRIPLES database: a community resource for yeast molecular biology.
Nucleic Acids Research 30(1): 73-75 (2002) |
| 2001 |
| 20 | | Kei-Hoi Cheung,
Yang Liu,
Anuj Kumar,
Michael Snyder,
Mark Gerstein,
Perry L. Miller:
An XML Application For Genomic Data Interoperation.
BIBE 2001: 97-103 |
| 19 | EE | Perry L. Miller,
Sandra J. Frawley,
Frederick G. Sayward:
Exploring the Utility of Demographic Data and Vaccination History Data in the Deduplication of Immunization Registry Patient Records.
Journal of Biomedical Informatics 34(1): 37-50 (2001) |
| 18 | EE | Perry L. Miller,
Sandra J. Frawley,
Frederick G. Sayward:
Maintaining and Incrementally Revalidating a Computer-Based Clinical Guideline: A Case Study.
Journal of Biomedical Informatics 34(2): 99-111 (2001) |
| 17 | | Michael V. Osier,
Kei-Hoi Cheung,
Judith R. Kidd,
Andrew J. Pakstis,
Perry L. Miller,
Kenneth K. Kidd:
ALFRED: an allele frequency database for diverse populations and DNA polymorphisms - an update.
Nucleic Acids Research 29(1): 317-319 (2001) |
| 2000 |
| 16 | | Emmanouil Skoufos,
Luis N. Marenco,
Prakash M. Nadkarni,
Perry L. Miller,
Gordon M. Shepherd:
Olfactory Receptor Database: a sensory chemoreceptor resource.
Nucleic Acids Research 28(1): 341-343 (2000) |
| 15 | | Kei-Hoi Cheung,
Michael V. Osier,
Judith R. Kidd,
Andrew J. Pakstis,
Perry L. Miller,
Kenneth K. Kidd:
ALFRED: an allele frequency database for diverse populations and DNA polymorphisms.
Nucleic Acids Research 28(1): 361-363 (2000) |
| 14 | | Anuj Kumar,
Kei-Hoi Cheung,
Petra Ross-MacDonald,
Paulo S. R. Coelho,
Perry L. Miller,
Michael Snyder:
TRIPLES: a database of gene function in Saccharomyces cerevisiae.
Nucleic Acids Research 28(1): 81-84 (2000) |
| 1999 |
| 13 | | Emmanouil Skoufos,
Matthew D. Healy,
Michael S. Singer,
Prakash M. Nadkarni,
Perry L. Miller,
Gordon M. Shepherd:
Olfactory Receptor Database: a database of the largest eukaryotic gene family.
Nucleic Acids Research 27(1): 343-345 (1999) |
| 1997 |
| 12 | | S. Panzer,
L. Cooley,
Perry L. Miller:
Using explicitly represented biological relationships for database navigation and searching via the World-Wide Web.
Computer Applications in the Biosciences 13(3): 281-290 (1997) |
| 1996 |
| 11 | | Prakash M. Nadkarni,
Kei-Hoi Cheung,
C. Castiglione,
Perry L. Miller,
Kenneth K. Kidd:
DNA Workbench: A Database Package to Manage Regional Physical Mapping.
Journal of Computational Biology 3(2): 319-330 (1996) |
| 1994 |
| 10 | | L. W. Wright,
J. B. Lichter,
John Reinitz,
M. A. Shifman,
Kenneth K. Kidd,
Perry L. Miller:
Computer-assisted restriction mapping: an integrated approach to handling experimental uncertainty.
Computer Applications in the Biosciences 10(4): 435-442 (1994) |
| 1992 |
| 9 | | Perry L. Miller,
Prakash M. Nadkarni,
P. A. Bercovitz:
Harnessing networked workstations as a powerful parallel computer: a general paradigm illustrated using three programs for genetic linkage analysis.
Computer Applications in the Biosciences 8(2): 141-147 (1992) |
| 8 | | Perry L. Miller,
Prakash M. Nadkarni,
William R. Pearson:
Comparing machine-independent versus machine-specific parallelization of a software platform for biological sequence comparison.
Computer Applications in the Biosciences 8(2): 167-175 (1992) |
| 1991 |
| 7 | | Perry L. Miller,
Prakash M. Nadkarni,
N. M. Carriero:
Parallel computation and FASTA: confronting the problem of parallel database search for a fast sequence comparison algorithm.
Computer Applications in the Biosciences 7(1): 71-78 (1991) |
| 6 | | Sheldon S. Ball,
Vei H. Mah,
Perry L. Miller:
SENEX: a computer-based representation of cellular signal transduction processes in the central nervous system.
Computer Applications in the Biosciences 7(2): 175-187 (1991) |
| 5 | | Michael Factor,
David Gelernter,
Craig E. Kolb,
Perry L. Miller,
Dean F. Sittig:
Real-Time Data Fusion in the Intensive Care Unit.
IEEE Computer 24(11): 45-54 (1991) |
| 1989 |
| 4 | | Glenn D. Rennels,
Edward H. Shortliffe,
Frank E. Stockdale,
Perry L. Miller:
A Computational Model of Reasoning from the Clinical Literature.
AI Magazine 10(1): 49-57 (1989) |
| 1988 |
| 3 | | Perry L. Miller,
Glenn D. Rennels:
Prose Generation from Expert Systems: An Applied Computational Linguistics Approach.
AI Magazine 9(3): 37-44 (1988) |
| 1986 |
| 2 | | Perry L. Miller:
Readings in Medical Artificial Intelligence: The First Decade (Book Review).
AI Magazine 6(4): 105 (1986) |
| 1983 |
| 1 | | Perry L. Miller:
Medical Plan-Analysis: The Attending System.
IJCAI 1983: 239-241 |