Terence P. Speed Vis

*	2009
24	EE	Mark D. Robinson, Terence P. Speed: Differential splicing using whole-transcript microarrays. BMC Bioinformatics 10: (2009)
23	EE	Henrik Bengtsson, Pratyaksha Wirapati, Terence P. Speed: A single-array preprocessing method for estimating full-resolution raw copy numbers from all Affymetrix genotyping arrays including GenomeWideSNP 5 & 6. Bioinformatics 25(17): 2149-2156 (2009)
22	EE	Sach Mukherjee, Steven Pelech, Richard M. Neve, Wen-Lin Kuo, Safiyyah Ziyad, Paul T. Spellman, Joe W. Gray, Terence P. Speed: Sparse combinatorial inference with an application in cancer biology. Bioinformatics 25(2): 265-271 (2009)
21	EE	Henrik Bengtsson, Amrita Ray, Paul T. Spellman, Terence P. Speed: A single-sample method for normalizing and combining full-resolution copy numbers from multiple platforms, labs and analysis methods. Bioinformatics 25(7): 861-867 (2009)
	2008
20	EE	E. Purdom, Ken M. Simpson, Mark D. Robinson, J. G. Conboy, A. V. Lapuk, Terence P. Speed: FIRMA: a method for detection of alternative splicing from exon array data. Bioinformatics 24(15): 1707-1714 (2008)
19	EE	Henrik Bengtsson, Rafael A. Irizarry, Benilton Carvalho, Terence P. Speed: Estimation and assessment of raw copy numbers at the single locus level. Bioinformatics 24(6): 759-767 (2008)
	2007
18		Terence P. Speed, Haiyan Huang: Research in Computational Molecular Biology, 11th Annual International Conference, RECOMB 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings Springer 2007
17	EE	Mark D. Robinson, Terence P. Speed: A comparison of Affymetrix gene expression arrays. BMC Bioinformatics 8: (2007)
16	EE	Mark D. Robinson, David P. De Souza, Woon Wai Keen, Eleanor C. Saunders, Malcolm J. McConville, Terence P. Speed, Vladimir A. Likic: A dynamic programming approach for the alignment of signal peaks in multiple gas chromatography-mass spectrometry experiments. BMC Bioinformatics 8: (2007)
	2006
15	EE	Nusrat Rabbee, Terence P. Speed: A genotype calling algorithm for affymetrix SNP arrays. Bioinformatics 22(1): 7-12 (2006)
	2005
14	EE	Tim Beißbarth, Jason A. Tye-Din, Gordon K. Smyth, Terence P. Speed, Robert P. Anderson: A systematic approach for comprehensive T-cell epitope discovery using peptide libraries. ISMB (Supplement of Bioinformatics) 2005: 29-37
13	EE	Xiaoyue Zhao, Haiyan Huang, Terence P. Speed: Finding Short DNA Motifs Using Permuted Markov Models. Journal of Computational Biology 12(6): 894-906 (2005)
	2004
12	EE	Xiaoyue Zhao, Haiyan Huang, Terence P. Speed: Finding short DNA motifs using permuted markov models. RECOMB 2004: 68-75
11	EE	Leslie Cope, Rafael A. Irizarry, Harris A. Jaffee, Zhijin Wu, Terence P. Speed: A benchmark for Affymetrix GeneChip expression measures. Bioinformatics 20(3): 323-331 (2004)
	2003
10	EE	Terence P. Speed: Low-level analyses of microarray data. RECOMB 2003: 287-287
9		Benjamin M. Bolstad, Rafael A. Irizarry, Magnus Åstrand, Terence P. Speed: A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 19(2): 185-193 (2003)
8	EE	Benjamin I. P. Rubinstein, Jon D. McAuliffe, Simon Cawley, Marimuthu Palaniswami, Kotagiri Ramamohanarao, Terence P. Speed: Machine learning in low-level microarray analysis. SIGKDD Explorations 5(2): 130-139 (2003)
	2002
7		Mauro Delorenzi, Terence P. Speed: An HMM model for coiled-coil domains and a comparison with PSSM-based predictions. Bioinformatics 18(4): 617-625 (2002)
	2001
6		Yee Hwa Yang, Michael J. Buckley, Terence P. Speed: Analysis of CDNA Microarray Images. Briefings in Bioinformatics 2(4): 341-349 (2001)
	2000
5		Simon Cawley, Terence P. Speed: DNA Sequencing with Transposons. Journal of Computational Biology 7(5): 717-729 (2000)
	1997
4	EE	Shili Lin, Terence P. Speed: An algorithm for haplotype analysis. RECOMB 1997: 192-200
3	EE	Terence P. Speed: Variations on a theme of Lander and Waterman (abstract). RECOMB 1997: 293
2		Shili Lin, Terence P. Speed: An Algorithm for Haplotype Analysis. Journal of Computational Biology 4(4): 535-546 (1997)
	1996
1		M.-Y. Leung, G. M. Marsh, Terence P. Speed: Over- and Underrepresentation of Short DNA Words in Herpesvirus Genomes. Journal of Computational Biology 3(3): 345-360 (1996)

Coauthor Index

1	Robert P. Anderson	[14]
2	Magnus Åstrand	[9]
3	Tim Beißbarth	[14]
4	Henrik Bengtsson	[19] [21] [23]
5	Benjamin M. Bolstad	[9]
6	Michael J. Buckley	[6]
7	Benilton Carvalho	[19]
8	Simon Cawley	[5] [8]
9	J. G. Conboy	[20]
10	Leslie Cope	[11]
11	Mauro Delorenzi	[7]
12	Joe W. Gray	[22]
13	Haiyan Huang	[12] [13] [18]
14	Rafael A. Irizarry	[9] [11] [19]
15	Harris A. Jaffee	[11]
16	Woon Wai Keen	[16]
17	Wen-Lin Kuo	[22]
18	A. V. Lapuk	[20]
19	M.-Y. Leung	[1]
20	Vladimir A. Likic	[16]
21	Shili Lin	[2] [4]
22	G. M. Marsh	[1]
23	Jon D. McAuliffe	[8]
24	Malcolm J. McConville	[16]
25	Sach Mukherjee	[22]
26	Richard M. Neve	[22]
27	Marimuthu Palaniswami	[8]
28	Steven Pelech	[22]
29	E. Purdom	[20]
30	Nusrat Rabbee	[15]
31	Kotagiri Ramamohanarao	[8]
32	Amrita Ray	[21]
33	Mark D. Robinson	[16] [17] [20] [24]
34	Benjamin I. P. Rubinstein	[8]
35	Eleanor C. Saunders	[16]
36	Ken M. Simpson	[20]
37	Gordon K. Smyth	[14]
38	David P. De Souza	[16]
39	Paul T. Spellman	[21] [22]
40	Jason A. Tye-Din	[14]
41	Pratyaksha Wirapati	[23]
42	Zhijin Wu	[11]
43	Yee Hwa Yang	[6]
44	Xiaoyue Zhao	[12] [13]
45	Safiyyah Ziyad	[22]

Colors in the list of coauthors